FUNDAMENTALS OF DRUG ACTION I

PHAR 331

PRINCIPLES OF THREE DIMENSIONAL STRUCTURE OF DRUGS AND DRUG TARGETS




TABLE OF CONTENTS

CHAPTERDESCRIPTION OF CONTENTS
0Introduction
1 Hybridization, valence angles and bond lengths: Hybrid orbitals (carbon, sp3, sp2, sp); hybridization of nitrogen, oxygen, phosphorus; bond lengths, angles and energies.
2Symmetry elements: Center of symmetry; plane of symmetry; axis of symmetry.
3Graphical representation of nonplanar molecules: Fisher projection; wedge projection; Newman projection; sawhorse projection; Haworth projection; stereodiagrams
4Interaction of drugs with biological matrices: Effect of chirality (enantiomerism).
5Rules for specification of chirality: Cahn-Ingold-Prelog rules; ligand precedence rules; helical chirality; Z/E geometry of double bonds; cis/trans geometry of alicyclic compounds; relative configurations in compounds with multiple chiral centers; meso compounds and pseudoasymmetry; chiroptical properties.
6 Conformation: Conformation; nomenclature; conformational energy and equilibria (sp2, amide bonds, ester bonds, anomeric effects); conformation of ring compounds (six-membered rings, cyclohexane and cyclohexene, five-membered rings, anomeric effect).
7Practice exams: Comprehensive problems and sample exams.

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LINKS TO OTHER STEREOCHEMISTRY TUTORIAL SITES

  1. Educational Materials for Organic chemistry
  2. BioChemNet
  3. The Learning Matters of Chemistry
  4. Tutorials in organic chemistry by Organic chemistry Resource Worldwide
  5. General Chemistry
  6. Chemistry Teaching Resources
  7. Stereochemistry Tutorials from the University of Arizona